| Gene Symbol | Jmjd6 |
|---|---|
| Entrez Gene | 360665 |
| Alt Symbol | Ptdsr |
| Species | Rat |
| Gene Type | protein-coding |
| Description | jumonji domain containing 6 |
| Other Description | bifunctional arginine demethylase and lysyl-hydroxylase JMJD6|histone arginine demethylase JMJD6|jmjC domain-containing protein 6|jumonji domain-containing protein 6|lysyl-hydroxylase JMJD6|peptide-lysine 5-dioxygenase JMJD6|phosphatidylserine receptor |
| Swissprots | Q6AYK2 |
| Accessions | EDM06699 Q6AYK2 BC079012 AAH79012 BM391923 CB789826 XM_006247806 XP_006247868 XR_358006 XR_358007 XR_358008 NM_001012143 NP_001012143 |
| Function | Dioxygenase that can both act as a histone arginine demethylase and a lysyl-hydroxylase. Acts as a lysyl-hydroxylase that catalyzes 5-hydroxylation on specific lysine residues of target proteins such as U2AF2/U2AF65 and LUC7L2. Acts as a regulator of RNA splicing by mediating 5-hydroxylation of U2AF2/U2AF65, affecting the pre-mRNA splicing activity of U2AF2/U2AF65. In addition to peptidyl-lysine 5-dioxygenase activity, may act as an RNA hydroxylase, as suggested by its ability to bind single strand RNA. Also acts as an arginine demethylase which demethylates histone H3 at 'Arg-2' (H3R2me) and histone H4 at 'Arg-3' (H4R3me), thereby playing a role in histone code. However, histone arginine demethylation may not constitute the primary activity in vivo. Has no histone lysine demethylase activity. Required for differentiation of multiple organs during embryogenesis. Acts as a key regulator of hematopoietic differentiation: required for angiogenic sprouting by regulating the pre-mRNA splici |
| Subcellular Location | Nucleus, nucleoplasm {ECO:0000250}. Nucleus, nucleolus {ECO:0000250}. Note=Mainly found throughout the nucleoplasm outside of regions containing heterochromatic DNA, with some localization in nucleolus. During mitosis, excluded from the nucleus and reappears in the telophase of the cell cycle (By similarity). {ECO:0000250}. |
Recombinant Rat Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6(Jm - CSB-YP738143RA CSB-EP738143RA CSB-BP738143RA CSB-MP738143RA from Cusabio
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Recombinant Rat JMJD6 Protein - JMJD6-3140R from Creative Biomart
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JMJD6-PTDSR-Blocking-Peptide-C-term - BP1042b from Abgent, a WuXi AppTec company
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JMJD6-PTDSR-Blocking-Peptide-N-term - BP1042a from Abgent, a WuXi AppTec company
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Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (Jmjd6), Recombinant Protein - MBS1286725 from MyBioSource
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